Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTCTTCCACAGCTGCAT
.((((((((.((..(..((((&))))...)..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024690
GeneSymbolMUC16
Binding site10947,10969
Score0.846
Seed1
Au0.485
Energy-23.0
Binding len22
Me-7.415
Phylopstem-0.8023292249999999
Phylopflank-1.5191491912500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure