Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCCCTGAGGGACCCCGCTCAGGTTCCTGTGGCTGCAGA
((((((((((((((((.....&))))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024691
GeneSymbolZNF419
Binding site207,251
Score0.846
Seed1
Au0.382
Energy-21.7
Binding len44
Me-3.938
Phylopstem0.05648363976744186
Phylopflank-0.2543125075000001
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end3
PositionCDS
2D Structure