Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTGCATTGTGGTTAGGTA
(((((((.((((((((((((..&))))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024692
GeneSymbolCLIP4
Binding site3609,3629
Score1.0
Seed1
Au0.676
Energy-21.8
Binding len20
Me-6.251
Phylopstem0.20809443333333333
Phylopflank0.32950056250000004
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure