Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCGGCCGGCCAGGCAGCGCGAT
((((.(((((((((((.((((&))))))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024693
GeneSymbolECHDC3
Binding site141,167
Score0.846
Seed0
Au0.265
Energy-21.8
Binding len26
Me-8.057
Phylopstem-0.38427957058823525
Phylopflank-0.5747714712500002
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end7
Position5UTR
2D Structure