Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATACTTTCATTGTGTATGTCAGGA
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024700
GeneSymbolSNIP1
Binding site4353,4379
Score1.0
Seed1
Au0.706
Energy-17.6
Binding len13
Me-6.908
Phylopstem1.6469132727272728
Phylopflank0.9388811455000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure