Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTTCAGTCTGTGCTGCAGT
(((((((.((((((((((((.&)))))..))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024700
GeneSymbolSNIP1
Binding site3380,3403
Score0.808
Seed1
Au0.559
Energy-19.3
Binding len23
Me-6.251
Phylopstem4.72539831
Phylopflank4.520867162500002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure