Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACACAGCCCCAGCTGCAGC
(((((((((.((((((..(((&)))..)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024721
GeneSymbolZFHX4
Binding site5832,5854
Score1.0
Seed1
Au0.456
Energy-27.3
Binding len22
Me-5.18
Phylopstem1.854155311111111
Phylopflank2.65068176875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure