Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCCGTGACAGCTGA
...(((((((((((((.((((&)))))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024721
GeneSymbolZFHX4
Binding site4343,4364
Score0.923
Seed0
Au0.456
Energy-23.5
Binding len21
Me-6.515
Phylopstem1.35458375
Phylopflank2.9344954475000007
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure