Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGAATGTCAGCTGCC
..(((((((..(((.((((((&)))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024726
GeneSymbolIQCA1
Binding site2390,2409
Score0.923
Seed1
Au0.426
Energy-20.4
Binding len19
Me-9.76
Phylopstem-0.6845856714285714
Phylopflank1.7974870587500005
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure