Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCAAAAGTGTTTAGATTTTGGTACTGCAACTGCT
..((((.((((((.(((((((&))))))).....................)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024727
GeneSymbolLRRC31
Binding site2119,2159
Score0.846
Seed0
Au0.574
Energy-19.4
Binding len40
Me-7.358
Phylopstem3.184942428571429
Phylopflank1.5593395247375001
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end7
Position3UTR
2D Structure