Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGCCTCAGCTGCT
..(((((((.((((((..(((&))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024734
GeneSymbolCLMN
Binding site8625,8643
Score0.904
Seed1
Au0.5
Energy-24.7
Binding len18
Me-6.2
Phylopstem-0.625879142857143
Phylopflank-0.35897489875
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure