Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGGGCCAGCAGCTGCC
..(((((((((((..(((((.&))))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024734
GeneSymbolCLMN
Binding site9160,9179
Score1.0
Seed1
Au0.485
Energy-22.7
Binding len19
Me-6.549
Phylopstem-0.04620929999999993
Phylopflank-0.40857630375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure