Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCGCAGCCGCGGGGACAACGTGTACGTGGTGACTGAGGTGCTGCAGA
((((((((((((((((..(((&)))..)))))))))............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024736
GeneSymbolGSDMD
Binding site556,606
Score0.821
Seed1
Au0.382
Energy-24.3
Binding len50
Me-3.938
Phylopstem-0.1390004545454546
Phylopflank-0.3178118625
Longest consecutive pairings9
Position of longest consecutive pairings36
Pairings in 3prime end6
PositionCDS
2D Structure