Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGGCAGCCGTGGCA
.....(((((((((((..(((&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024738
GeneSymbolSPRING1
Binding site614,631
Score0.923
Seed0
Au0.412
Energy-22.2
Binding len17
Me-13.666
Phylopstem-0.5228073090909091
Phylopflank-0.12508429625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure