Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAACGGCTGCTGCAGC
(((((((.((.((((...(((&))))))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024738
GeneSymbolSPRING1
Binding site528,547
Score0.923
Seed1
Au0.397
Energy-21.3
Binding len19
Me-9.309
Phylopstem-0.14742521428571428
Phylopflank-0.06653602874999998
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure