Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGGAGGATGCAGCAGAACCTTGCATAGATCCTGGTTC
.(((((((((.((((((((..&)))))))).)))))....................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_024741
GeneSymbolZNF408
Binding site640,679
Score0.923
Seed1
Au0.426
Energy-22.6
Binding len39
Me-6.618
Phylopstem0.484639301724138
Phylopflank0.13439354999999997
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure