Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGACAAAGAGGCAGCTGTAGC
((((((((((..((((..(((&)))..))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024741
GeneSymbolZNF408
Binding site568,592
Score0.923
Seed1
Au0.426
Energy-21.9
Binding len24
Me-10.109
Phylopstem-0.16594056000000001
Phylopflank0.13172889250000008
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure