Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCGCTGCCCACACTGTGCCGATGCCTTCCCCCAGCTGCC
..(((((((((((.((((((.&)))))).))))).........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024741
GeneSymbolZNF408
Binding site1583,1627
Score0.846
Seed1
Au0.353
Energy-22.0
Binding len44
Me-5.814
Phylopstem1.1474624611111113
Phylopflank1.8669447899999998
Longest consecutive pairings6
Position of longest consecutive pairings38
Pairings in 3prime end6
PositionCDS
2D Structure