Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGCCTTCTGCATTGAAATTTGAGGTGGTCCATATGCCACAGGA
.((((((((((((((((((...&.))))))))).................)))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024743
GeneSymbolUGT2A3
Binding site244,289
Score0.923
Seed1
Au0.632
Energy-18.8
Binding len39
Me-3.793
Phylopstem0.008137468513513497
Phylopflank0.18434363012500005
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end5
PositionCDS
2D Structure