Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGCACCTGCGATCAGCTGCC
..(((((((..(((((.((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024743
GeneSymbolUGT2A3
Binding site1454,1478
Score1.0
Seed1
Au0.412
Energy-19.8
Binding len18
Me-9.024
Phylopstem2.9229978571428568
Phylopflank1.2615946325
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure