Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAAGGAGCAGCTGTAGA
((((((((((........(((&)))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024743
GeneSymbolUGT2A3
Binding site1259,1279
Score1.0
Seed1
Au0.603
Energy-17.7
Binding len20
Me-13.224
Phylopstem-0.18900199
Phylopflank-0.2516474225
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure