Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAATGACCGCGGCC
.....(((((((((((..(((&))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024746
GeneSymbolHHIPL2
Binding site513,529
Score0.846
Seed0
Au0.397
Energy-19.5
Binding len16
Me-13.666
Phylopstem0.662889909090909
Phylopflank-0.005635970000000018
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure