Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCCGCACACACGTCCTGCTGCAC
.(((((((((((((...((((&)))).)))))))..........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024747
GeneSymbolHPS6
Binding site655,684
Score0.846
Seed1
Au0.294
Energy-21.7
Binding len29
Me-4.762
Phylopstem2.172018443478261
Phylopflank1.87226658125
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end5
PositionCDS
2D Structure