Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTAGGCTGCGGCGAGACAAT
((((.(((((((((..((((.&))))..)))))))))..).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024753
GeneSymbolTTC21B
Binding site14,37
Score0.923
Seed0
Au0.318
Energy-20.6
Binding len23
Me-9.025
Phylopstem0.45865999999999985
Phylopflank0.31687305374999997
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure