Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTACAGCCGAACAGCC
.....(((((((((((((.((&)).)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024753
GeneSymbolTTC21B
Binding site2106,2125
Score0.846
Seed0
Au0.588
Energy-18.6
Binding len19
Me-13.666
Phylopstem5.119246866666667
Phylopflank5.304852678374999
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure