Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGAAGTACCATTTCAGCTGCAT
.((((((((.(((..((((((&))))))....)))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366307
GeneSymbolKPNA5
Binding site7523,7549
Score1.0
Seed1
Au0.662
Energy-21.0
Binding len26
Me-6.628
Phylopstem0.274465675
Phylopflank0.15233694125000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure