Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCTTGCCTTTTGTTTTAGCAGCTGCAGT
(((((((((((((.(((((.(&).)))))..)))..........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024757
GeneSymbolEHMT1
Binding site845,878
Score1.0
Seed1
Au0.574
Energy-23.4
Binding len33
Me-4.794
Phylopstem2.746025608695652
Phylopflank4.4733215600000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure