Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGGCGATGTGAATGTCAATCTTTACAACCTTCAGGACAGCTGCC
..((((((((((((((((((.&.)))))))))).....).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024758
GeneSymbolAGMAT
Binding site451,499
Score1.0
Seed1
Au0.574
Energy-23.8
Binding len26
Me-4.957
Phylopstem0.11746212500000003
Phylopflank-0.07505818125000002
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure