Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATTTCTGCAGCTAGCAAA
((((((((((((((((.....&))))...)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024764
GeneSymbolCATSPERB
Binding site2524,2545
Score1.0
Seed1
Au0.618
Energy-19.2
Binding len21
Me-3.938
Phylopstem1.2931949
Phylopflank0.5229922950000002
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure