Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGGCTGGAGCTGCAGA
((((((((.(((((...((((&))))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024768
GeneSymbolEFCC1
Binding site1808,1829
Score0.981
Seed1
Au0.397
Energy-25.2
Binding len21
Me-5.962
Phylopstem5.0760953749999995
Phylopflank3.25016113625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure