Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGAGGTTGCAGTGA
....((((((((((..(((((&)))))))))))))).).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_024769
GeneSymbolCLMP
Binding site2506,2523
Score0.923
Seed0
Au0.471
Energy-22.7
Binding len17
Me-10.515
Phylopstem-0.12429118363636364
Phylopflank0.08070666974999997
Longest consecutive pairings14
Position of longest consecutive pairings3
Pairings in 3prime end6
Position3UTR
2D Structure