Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTGCAGCTGTAT
.(((((((((((((.......&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024769
GeneSymbolCLMP
Binding site4262,4276
Score1.0
Seed1
Au0.603
Energy-21.7
Binding len14
Me-4.762
Phylopstem3.188937384615384
Phylopflank2.9572051737500002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure