Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAATCTCATGCTGCT
..(((((((.(((((((....&))))))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024781
GeneSymbolCCDC102B
Binding site262,279
Score1.0
Seed1
Au0.544
Energy-18.2
Binding len17
Me-6.2
Phylopstem-0.47822904285714285
Phylopflank0.031470605
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure