Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTACAGCCTGCAGCTT
....(((((((((((((..((&)).))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024790
GeneSymbolCSPP1
Binding site1652,1670
Score0.923
Seed0
Au0.515
Energy-19.8
Binding len18
Me-9.547
Phylopstem0.9562305999999999
Phylopflank1.6309510449999998
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure