Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACCATAACCCAGATGCAAG
(((((.(((.((((((.((((&))))...))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024790
GeneSymbolCSPP1
Binding site2026,2049
Score1.0
Seed0
Au0.632
Energy-19.7
Binding len23
Me-7.081
Phylopstem3.491229316666667
Phylopflank3.8413638580000002
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure