Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAGCAGCAGA
......((((.((((((((((&)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024790
GeneSymbolCSPP1
Binding site1828,1844
Score0.846
Seed0
Au0.559
Energy-18.6
Binding len16
Me-18.391
Phylopstem2.4862296
Phylopflank2.8637494475
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure