Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCGCAGATCTGCAGG
((((((((((((((.......&))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024791
GeneSymbolPDZD3
Binding site28,45
Score1.0
Seed1
Au0.515
Energy-20.3
Binding len17
Me-4.906
Phylopstem1.0600276875
Phylopflank1.4484684194444446
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end1
PositionCDS
2D Structure