Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGGGACTTCTTTGTCGGCTGCAT
.(((((((((((((.((((((&))))))..)))).....).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024792
GeneSymbolTLCD3A
Binding site473,501
Score0.923
Seed1
Au0.412
Energy-19.9
Binding len28
Me-4.529
Phylopstem4.878903736842105
Phylopflank3.699066822499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure