Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTTCCAGCTGCCCTGGCTGCC
..(((((((((((((..(((.&)))....)))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024794
GeneSymbolEPHX3
Binding site902,926
Score0.923
Seed1
Au0.456
Energy-21.3
Binding len24
Me-5.19
Phylopstem2.35032385
Phylopflank1.92393808625
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure