Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCCGCAGTCTGCGAT
(((((((((((((...(((((&)))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024798
GeneSymbolSNX22
Binding site2178,2198
Score1.0
Seed1
Au0.441
Energy-22.9
Binding len20
Me-5.763
Phylopstem2.9162820714285718
Phylopflank3.4711962437499997
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure