Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAAGGAAGTGAATGCAGCAATCGCAGCCACGAA
(((..(((((((((((.....&.)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024803
GeneSymbolTUBAL3
Binding site1029,1064
Score0.846
Seed0
Au0.485
Energy-20.2
Binding len18
Me-11.089
Phylopstem3.8234691818181825
Phylopflank3.5095843125000004
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure