Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGGCTGTGGCTGCT
..((((((((((((((.....&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024806
GeneSymbolJHY
Binding site2600,2616
Score1.0
Seed1
Au0.544
Energy-19.7
Binding len16
Me-4.957
Phylopstem3.486150466666666
Phylopflank1.6810582225000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure