Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGTAGGGATGTGGGA
....((((((.(((((((((.&))))).)))).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_024808
GeneSymbolBORA
Binding site2482,2500
Score0.872
Seed0
Au0.529
Energy-22.2
Binding len18
Me-12.371
Phylopstem0.185577755
Phylopflank-0.112314415625
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure