Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGGCCGGAGTCTGCGGG
((((((((.(((((((.....&))))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024811
GeneSymbolCPSF7
Binding site150,168
Score0.923
Seed1
Au0.309
Energy-21.3
Binding len18
Me-4.994
Phylopstem3.2982841111111108
Phylopflank2.1894095
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure