Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTGGACCACAGACCAGCAGCTGA
...(((((((((((....(((&.)))...)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024811
GeneSymbolCPSF7
Binding site542,569
Score0.923
Seed0
Au0.471
Energy-20.8
Binding len20
Me-7.483
Phylopstem0.42172575000000007
Phylopflank0.30574436250000003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure