Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATGTCCATCCTGTGCCAGGTA
((((((((((..(((.(.((((&)))).).)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024812
GeneSymbolBAALC
Binding site2041,2064
Score0.846
Seed1
Au0.588
Energy-20.0
Binding len23
Me-10.342
Phylopstem0.2508743
Phylopflank-0.09770854000000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure