Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCGCGGCTGCAGCGCGGG
((((.(((((((((((..((.&))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024812
GeneSymbolBAALC
Binding site30,50
Score0.923
Seed0
Au0.162
Energy-24.4
Binding len20
Me-8.057
Phylopstem0.13700716363636364
Phylopflank0.046416158333333346
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure