Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAACATGTTCAGGAAATTCTGGACTCCCTTGGGGCTTGCAAA
((((((((.((((((((((((&)))))))))).........................)).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024813
GeneSymbolRPAP2
Binding site14090,14138
Score0.923
Seed1
Au0.529
Energy-21.6
Binding len48
Me-4.994
Phylopstem1.9105897129729734
Phylopflank1.2360074419999998
Longest consecutive pairings10
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure