Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GACCACAGCTGCAC
.((((((((.((((.......&)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024813
GeneSymbolRPAP2
Binding site730,744
Score1.0
Seed1
Au0.647
Energy-20.8
Binding len14
Me-6.004
Phylopstem1.110052125
Phylopflank1.5945354925
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure