Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACACAGCTGCAGCTCTTCAAGCAGT
((((((((((((((((..(((&)))..))))))))))))......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024820
GeneSymbolDENND1A
Binding site1292,1320
Score0.923
Seed1
Au0.544
Energy-24.5
Binding len28
Me-3.938
Phylopstem0.8424638363636365
Phylopflank0.4546396462500001
Longest consecutive pairings12
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure